BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B05SP1|AL426471
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1405 1604 0.0
>3x_Contig1405
Length = 9155
Score = 1604 bits (808), Expect = 0.0
Identities = 817/820 (99%), Gaps = 1/820 (0%)
Strand = Plus / Minus
Query: 1 gatcctaaatatgcacaacacccttcgtcaggttttatggatatgggaggtgcttcaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2906 gatcctaaatatgcacaacacccttcgtcaggttttatggatatgggaggtgcttcaacg 2847
Query: 61 caactagcgttcatgccgagtgacccggaagaaattgcaaggcataaaaagtatatgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2846 caactagcgttcatgccgagtgacccggaagaaattgcaaggcataaaaagtatatgcac 2787
Query: 121 accatatatttgaagaatgtcaatggtgacacccaagaatgggatgtattcgtgagtwca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2786 accatatatttgaagaatgtcaatggtgacacccaagaatgggatgtattcgtgagtaca 2727
Query: 181 tggttggggtttggagccaatagggcaaggtctaggtatttggctcaactaattaattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2726 tggttggggtttggagccaatagggcaaggtctaggtatttggctcaactaattaattcg 2667
Query: 241 ttacctgaaaacgcaaatgaggaagatgatgacgactacaagacaagatatattagcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 ttacctgaaaacgcaaatgaggaagatgatgacgactacaagacaagatatattagcgat 2607
Query: 301 ccatgtttaccgaagg-agcaaaaaccgagtttgagttcaaggatagagatttcgaaatc 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 ccatgtttaccgaagggagcaaaaaccgagtttgagttcaaggatagagatttcgaaatc 2547
Query: 360 acaggtgctggtgactttgtacattgtatgaagtcgatgtatccgttacttttgaacaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546 acaggtgctggtgactttgtacattgtatgaagtcgatgtatccgttacttttgaacaat 2487
Query: 420 ctaccttgcttagaagaaccttgtctcttcaatggtgtacatgcaccaaggattaatttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 ctaccttgcttagaagaaccttgtctcttcaatggtgtacatgcaccaaggattaatttt 2427
Query: 480 gaacaagataagtttgtgggtatttcagagtactggtatacagcaaatgatgtgttcaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 gaacaagataagtttgtgggtatttcagagtactggtatacagcaaatgatgtgttcaag 2367
Query: 540 atgagtggggagtataatttccatgaattctcgaagaacgtcaaagaattctgtgaatct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 atgagtggggagtataatttccatgaattctcgaagaacgtcaaagaattctgtgaatct 2307
Query: 600 gattggmatacgttgaaagagaacaacgctaatggagtgtacaacaatataccagatgac 659
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 gattggaatacgttgaaagagaacaacgctaatggagtgtacaacaatataccagatgac 2247
Query: 660 ttcttactggatagttgtttcaaggcgaactggatattgaacgtcttacatgagggcttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 ttcttactggatagttgtttcaaggcgaactggatattgaacgtcttacatgagggcttt 2187
Query: 720 gaccttcctaggatggatatagacattccagacgactcaaaaagcgacgatgatagacat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 gaccttcctaggatggatatagacattccagacgactcaaaaagcgacgatgatagacat 2127
Query: 780 gttccattccagagtgttgaaaaaattaacaaccaagacg 819
||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 gttccattccagagtgttgaaaaaattaacaaccaagacg 2087
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5853
Number of Sequences: 1807
Number of extensions: 5853
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)